Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888947.1_cds_XP_016443608.1_38750
CDS Infomation

[gene=LOC107768944] [db_xref=GeneID:107768944] [protein=potassium channel KOR1-like isoform X3] [protein_id=XP_016443608.1] [location=join(23862..24034,24129..24192,25081..25420,26562..26857,27014..27094,27739..27837,28645..28869,29076..29351)] [gbkey=CDS]
Sequence

ATGGGCGATTTACTCCTCCTTCTTCACTCCCCTGGAGTTTGGGTTTTTCAGAGGACTCCC
CGAAAATCTGTTCCTTCTGGACATTGCCGGCCAAATTGCTTTCCTCATCGACATCGTCGT
TCTCTTTTTTGTTGCGTATCGAGACGCTCATTCTTACTGCATGGTCTACGACCGTACTTG
AAATCTCGTTTCCTGGTGGACTTGCTAGGTTGCTTCCCATGGGATGCTATATACAAGGCT
TGTGGAAGAAAGGAGCCAGTTAGATACCTCTTATGGATTAGGCTAAGCCGAGCCCTTAGA
GTGACAGAGTTTTTTGAAAAGCTGGAGAAAGACATCCGTCTAAATTATCTGTTTACAAGG
ATTGTGAAGTTATTAGTTGTCGAAGTATACTGCACTCACACCGCTGCTTGTATTTTTTAC
TATCTGGCTACTACATTGCCTCCATGGGAGGAAGGTTACACGTGGATAGGAAGCCTGAAG
ATGGGTGACTATAGTTATGCACATTTCCGAGGCATTGATCTTTGGACTCGCTATATCACA
TCTTTGTACTTTGCCATTGTCACCATGGCAACTGTTGGTTATGGAGAAATTCATGCAGTC
AATACCAAGGAAATGATATTTGTAATGATTTATGTCTCTTTTGACATGATTCTTGGTGCC
TACCTACTTGGTAATATGGCAGCATTAATTGTAAAAGGATCCAAAACTGAAAAGTTCAGG
GATAAAATGGCAGATATTATAAAGTATATGAACAGAAACAGGCTGGGGAAACGCATAAGC
AAAGAGATCAAAGATCATGTCAGATTACAGTATGAGAGCCGATATAATGAGTCTTCTGTT
CTTCAGGATATTCCTGCTTCAATTCGAGCTAAGATTTCGCAAAAGTTGTATGAGCCCTAC
ATCAGAGGAGTCCCACTTTTCAGAGGTTGCTCGCATGAATTTATCAAACAGATTGCAATC
AAAGTACATGAAGAATTTTTCCTTCCAGGGGAAGTGATTATGGAACAGGGTAGCATGGCA
GATCAACTGTATTTTGTCTGTCATGGTAAAGTGGAAGAAGTTAGAAAACCAGAAGAAAAT
GAAACTGAAGAATCTCTCCTGGATCTTCACACTTACAACTCTGTTGGTGAAATTTCTGTT
CTTTGTAACATCCCAGTCCCTTATACAGTTCAAGTTTATGAGTTATCTAGACTGCTACGA
ATTGATAAACAAGCTCTGGTGGAGATTCTGGGGATATACTTCTCTGACGGGCGTGTAATC
ATCAATAATCTACTTGAGGGAAGAGAGTCAAGCCTTCGAAGCAAGATATTGGATTCAGAC
ATAACACTGAATATTGCGAAACATGAATCTGAGCTCACGATGAGGTTGAACTGTGCAGCT
CACGATGGAGATTTGTATCGTCTAAGTCGTATAATTGGTGCAGGAGCAGACCCCAGCCGA
ACTGATTATGATGGAAGATCACCCCTGGTATCTATTTCTAGCTTTTGTAAAGTGTGTGGA
GAAAGATATATCTTTGCTTGGACTTATTATATCTTTGCTTGGACTTTCCTATAA

Peptide Sequence

PEP ID

XP_016443608.1
PEP Infomation

PREDICTED: potassium channel KOR1-like isoform X3 [Nicotiana tabacum]
Sequence

MGDLLLLLHSPGVWVFQRTPRKSVPSGHCRPNCFPHRHRRSLFCCVSRRSFLLHGLRPYL
KSRFLVDLLGCFPWDAIYKACGRKEPVRYLLWIRLSRALRVTEFFEKLEKDIRLNYLFTR
IVKLLVVEVYCTHTAACIFYYLATTLPPWEEGYTWIGSLKMGDYSYAHFRGIDLWTRYIT
SLYFAIVTMATVGYGEIHAVNTKEMIFVMIYVSFDMILGAYLLGNMAALIVKGSKTEKFR
DKMADIIKYMNRNRLGKRISKEIKDHVRLQYESRYNESSVLQDIPASIRAKISQKLYEPY
IRGVPLFRGCSHEFIKQIAIKVHEEFFLPGEVIMEQGSMADQLYFVCHGKVEEVRKPEEN
ETEESLLDLHTYNSVGEISVLCNIPVPYTVQVYELSRLLRIDKQALVEILGIYFSDGRVI
INNLLEGRESSLRSKILDSDITLNIAKHESELTMRLNCAAHDGDLYRLSRIIGAGADPSR
TDYDGRSPLVSISSFCKVCGERYIFAWTYYIFAWTFL

Transcript Sequence

Gene sequence data has not been registered.